ABOUT THIS RECORDspecies: Leucoraja erinacea
miRNA family: miR-3091
source: miRNEST
Taxonomy by NCBI:
Leucoraja erinacea Leucoraja Rajinae Rajidae Rajiformes Batoidea Pristiorajea Hypnosqualea Squalea Neoselachii Elasmobranchii Chondrichthyes Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATGGGTCTGGTTGGGCCCGC miRNA* GGGCCTGACCAGTCTCAAGAC mismatches: 3 bulges: 0 |
pre-miRNA
ATGGCCGAGAGTGCTTGCGGGCCATGGGTCTGGTTGGGCCCGCAGACTCGGAGTGCGGGCCTGACCAGTCTCAAGACCTGCGTGGTAACTCTGCAG
dot-bracket secondary structure
...((.(((..((((.(((((...((((.(((((((((((((((.........))))))))))))))).))))...)))))..)))).))).))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGGCCGAGAGTGCTTGCGGGCCATGGGTCTGGTTGGGCCCGCAGACTCGGAGTGCGGGCCTGACCAGTCTCAAGACCTGCGTGGTAACTCTGCAG
dot-bracket secondary structure
...((.(((..((((.(((((...((((.(((((((((((((((.........))))))))))))))).))))...)))))..)))).))).))..
SIMILARITIES| miRBase mmu-mir-3091: 1e-37 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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