ABOUT THIS RECORDspecies: Rana catesbeiana
miRNA family: miR-3126
source: miRNEST
Taxonomy by NCBI:
Rana catesbeiana Aquarana Aquarana/sylvatica group Novirana Rana Raninae Ranidae Ranoidea Neobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGGGTCAGATGACAGAAGA miRNA* TTTTTTTTTCTGCCACTAAAG mismatches: 3 bulges: 2 |
pre-miRNA
AAGGAAAGTTTTGAGGGTCAGATGACAGAAGACAACATTGAAGTTGGTATTTGCAATGAAGCTGGATTTAAGCGACTCACTCCTGCTGAAGTCAAAGATT
ACTTAGCTGCTATAGCATAAAAGGCTTCCAGTCCTGTGTAGTGTTTTTTTTTTTCTGCCACTAAAGGATTCAA
dot-bracket secondary structure
...(((..((((.((((.((((.((.((((((((((((.((((((......(((.(((.((((.(((((.((((.........)))).))))).(((...
.)))))))..))).))).....)))))).......))))..)))))))).)).)))))).)).)))).)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AAGGAAAGTTTTGAGGGTCAGATGACAGAAGACAACATTGAAGTTGGTATTTGCAATGAAGCTGGATTTAAGCGACTCACTCCTGCTGAAGTCAAAGATT
ACTTAGCTGCTATAGCATAAAAGGCTTCCAGTCCTGTGTAGTGTTTTTTTTTTTCTGCCACTAAAGGATTCAA
dot-bracket secondary structure
...(((..((((.((((.((((.((.((((((((((((.((((((......(((.(((.((((.(((((.((((.........)))).))))).(((...
.)))))))..))).))).....)))))).......))))..)))))))).)).)))))).)).)))).)))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P24495|PSA2_XENLA: 0.000000000000002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
