miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Xenopus laevis, Rana catesbeiana, Cynops pyrrhogaster, Ambystoma tigrinum tigrinum



ABOUT THIS RECORD

ID: MNEST009466
species: Rana catesbeiana
miRNA family: miR-1638
source: miRNEST

Taxonomy by NCBI:
Rana catesbeiana Aquarana Aquarana/sylvatica group Novirana Rana Raninae Ranidae Ranoidea Neobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTAGTTTGTGTTGTGTGTTTT

miRNA*
 AGCCAAGTACACAGTCTGTCC

mismatches: 3
bulges: 2
View larger
pre-miRNA
 CCTATCTATGAAAGCCAAGTACACAGTCTGTCCAAATTGAAATCCACAATTGGTGGCTTGTTTGAAAAGTGAATTATTTTTTGCTATAAAACAATATCAA
AGCGGTGTAACATTTAGCTTGATGTTGCCCATTTAAGTGAATTTACCAATGCACATGCAACAAATCTTTTTAATATGGGTAGTTTGTGTTGTGTGTTTTT
TTTTTTAA

dot-bracket secondary structure
.........((((((((...((((((.(((((((.(((((((......((((((((.((((((....((((((......))))))...))))))..((((
((.((.((((((((......)))))))))).)))...)))..)))))))).................))))))).))))))).))))))..)).))))))
........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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