ABOUT THIS RECORDspecies: Misgurnus anguillicaudatus
miRNA family: miR-2527
source: miRNEST
Taxonomy by NCBI:
Misgurnus anguillicaudatus Misgurnus Cobitinae Cobitidae Cobitoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGATGGATGGAGGTATAGAGA miRNA* TCTATACCTAATTCCTTCAGA mismatches: 4 bulges: 0 |
pre-miRNA
ATCGCTTCTTATGATGGATGGAGGTATAGAGAAGTAATATCCAGCTTTCACACCCTCCATTGCGACTGAAGGTTTGCCATCAAATGCATGTAACAGAGCA
TTCTCTATACCTAATTCCTTCAGAAGATGGAC
dot-bracket secondary structure
.((...((((.(((.(((...((((((((((((..........(((((.(((........((((..(((.((....)).)))..)))))))...))))).
))))))))))))...))).))).))))..)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ATCGCTTCTTATGATGGATGGAGGTATAGAGAAGTAATATCCAGCTTTCACACCCTCCATTGCGACTGAAGGTTTGCCATCAAATGCATGTAACAGAGCA
TTCTCTATACCTAATTCCTTCAGAAGATGGAC
dot-bracket secondary structure
.((...((((.(((.(((...((((((((((((..........(((((.(((........((((..(((.((....)).)))..)))))))...))))).
))))))))))))...))).))).))))..)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q6GPM3|TAT3B_XENLA: 0.0000000000002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
