miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Oryzias latipes, Salmo salar, Ictalurus punctatus, Oncorhynchus mykiss, Gasterosteus aculeatus, Pimephales promelas, Gadus morhua, Ictalurus furcatus, Oreochromis niloticus, Fundulus heteroclitus, Sparus aurata, Dicentrarchus labrax, Dissostichus mawsoni, Osmerus mordax, Anoplopoma fimbria, Cyprinus carpio, Esox lucius, Takifugu rubripes, Sebastes caurinus, Misgurnus anguillicaudatus, Perca flavescens, Paralabidochromis chilotes, Hippoglossus hippoglossus, Rutilus rutilus, Poecilia reticulata, Oncorhynchus tshawytscha, Paralichthys olivaceus, Psetta maxima, Lates calcarifer, Oncorhynchus nerka, Sebastes rastrelliger, Thymallus thymallus, Solea senegalensis, Coregonus clupeaformis, Thunnus thynnus, Cynoglossus semilaevis, Salvelinus fontinalis



ABOUT THIS RECORD

ID: MNEST009547
species: Misgurnus anguillicaudatus
miRNA family: miR-2527
source: miRNEST

Taxonomy by NCBI:
Misgurnus anguillicaudatus Misgurnus Cobitinae Cobitidae Cobitoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGATGGATGGAGGTATAGAGA

miRNA*
TCTATACCTAATTCCTTCAGA

mismatches: 4
bulges: 0

View larger
pre-miRNA
ATCGCTTCTTATGATGGATGGAGGTATAGAGAAGTAATATCCAGCTTTCACACCCTCCATTGCGACTGAAGGTTTGCCATCAAATGCATGTAACAGAGCA
TTCTCTATACCTAATTCCTTCAGAAGATGGAC


dot-bracket secondary structure
.((...((((.(((.(((...((((((((((((..........(((((.(((........((((..(((.((....)).)))..)))))))...))))).
))))))))))))...))).))).))))..)).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q6GPM3|TAT3B_XENLA: 0.0000000000002

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;