ABOUT THIS RECORDspecies: Ambystoma tigrinum tigrinum
miRNA family: mir-467
source: miRNEST
Taxonomy by NCBI:
Ambystoma tigrinum tigrinum Ambystoma tigrinum Ambystoma Ambystomatidae Salamandroidea Caudata Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTGCATGTGTATGTATGT miRNA* ATTTGTGCATGTGTATCTGTG mismatches: 4 bulges: 0 |
pre-miRNA
ATGTTGTGAGTCTTTCCATAATTAAATAAAACATTTGTGCATGTGTATCTGTGTGTGTGCATGTGTATGTATGTGTGTGTGTGTGTGATCTAGAAAAAGG
CCA
dot-bracket secondary structure
..(((.....(((.((((((.....(((..((((.(((((((((((((........))))))))))))).)))).)))...)))).))...)))....))
)..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ATGTTGTGAGTCTTTCCATAATTAAATAAAACATTTGTGCATGTGTATCTGTGTGTGTGCATGTGTATGTATGTGTGTGTGTGTGTGATCTAGAAAAAGG
CCA
dot-bracket secondary structure
..(((.....(((.((((((.....(((..((((.(((((((((((((........))))))))))))).)))).)))...)))).))...)))....))
)..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
