miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ambystoma tigrinum tigrinum



ABOUT THIS RECORD

ID: MNEST009591
species: Ambystoma tigrinum tigrinum
miRNA family: mir-467
source: miRNEST

Taxonomy by NCBI:
Ambystoma tigrinum tigrinum Ambystoma tigrinum Ambystoma Ambystomatidae Salamandroidea Caudata Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGTGCATGTGTATGTATGT

miRNA*
ATTTGTGCATGTGTATCTGTG

mismatches: 4
bulges: 0

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pre-miRNA
ATGTTGTGAGTCTTTCCATAATTAAATAAAACATTTGTGCATGTGTATCTGTGTGTGTGCATGTGTATGTATGTGTGTGTGTGTGTGATCTAGAAAAAGG
CCA


dot-bracket secondary structure
..(((.....(((.((((((.....(((..((((.(((((((((((((........))))))))))))).)))).)))...)))).))...)))....))
)..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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