ABOUT THIS RECORDspecies: Caenorhabditis remanei
miRNA family: miR-1396
source: miRNEST
Taxonomy by NCBI:
Caenorhabditis remanei Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTGTTGATTGGTTGCTGTGT miRNA* ATGGCTCCTATCAGCTCTTG mismatches: 5 bulges: 1 |
pre-miRNA
GCCAACATGTACTGCTGTGAGCATATCCAAACATGGCTCCTATCAGCTCTTGCAGTCATTGCAATCTTCCTTTCCCTTCTGTTGATTGGTTGCTGTGTTC
GATGCTGCTGCAGTTACAAACGGAAAA
dot-bracket secondary structure
.......((((((((.((.(((((.....((((((((.((.((((((..(((((.....)))))................)))))).))..)))))))).
.))))))).)))).)))).........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCCAACATGTACTGCTGTGAGCATATCCAAACATGGCTCCTATCAGCTCTTGCAGTCATTGCAATCTTCCTTTCCCTTCTGTTGATTGGTTGCTGTGTTC
GATGCTGCTGCAGTTACAAACGGAAAA
dot-bracket secondary structure
.......((((((((.((.(((((.....((((((((.((.((((((..(((((.....)))))................)))))).))..)))))))).
.))))))).)))).)))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
