miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Caenorhabditis elegans, Heterorhabditis bacteriophora, Caenorhabditis japonica, Caenorhabditis brenneri, Caenorhabditis remanei



ABOUT THIS RECORD

ID: MNEST009596
species: Caenorhabditis remanei
miRNA family: miR-1396
source: miRNEST

Taxonomy by NCBI:
Caenorhabditis remanei Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTGTTGATTGGTTGCTGTGT

miRNA*
ATGGCTCCTATCAGCTCTTG

mismatches: 5
bulges: 1

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pre-miRNA
GCCAACATGTACTGCTGTGAGCATATCCAAACATGGCTCCTATCAGCTCTTGCAGTCATTGCAATCTTCCTTTCCCTTCTGTTGATTGGTTGCTGTGTTC
GATGCTGCTGCAGTTACAAACGGAAAA


dot-bracket secondary structure
.......((((((((.((.(((((.....((((((((.((.((((((..(((((.....)))))................)))))).))..)))))))).
.))))))).)))).)))).........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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