ABOUT THIS RECORDspecies: Lumbricus rubellus
miRNA family: miR-1402
source: miRNEST
Taxonomy by NCBI:
Lumbricus rubellus Lumbricus Lumbricidae Lumbricina Haplotaxida Oligochaeta Clitellata Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACGGAGAAGGTGGAAGTGAAT miRNA* CCACTCTACACTTTCCTTA mismatches: 3 bulges: 2 |
pre-miRNA
ATTTTGAGTTAACGGAGAAGGTGGAAGTGAATGGCGCAAATGAACATCCACTCTACACTTTCCTTAAGGCCTAT
dot-bracket secondary structure
........((((.(((((..(((((.(((.(((.(......)..))).))))))))..))))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTTTGAGTTAACGGAGAAGGTGGAAGTGAATGGCGCAAATGAACATCCACTCTACACTTTCCTTAAGGCCTAT
dot-bracket secondary structure
........((((.(((((..(((((.(((.(((.(......)..))).))))))))..))))))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
