miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helobdella robusta, Lumbricus rubellus, Tubifex tubifex



ABOUT THIS RECORD

ID: MNEST009604
species: Lumbricus rubellus
miRNA family: miR-1402
source: miRNEST

Taxonomy by NCBI:
Lumbricus rubellus Lumbricus Lumbricidae Lumbricina Haplotaxida Oligochaeta Clitellata Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACGGAGAAGGTGGAAGTGAAT

miRNA*
CCACTCTACACTTTCCTTA

mismatches: 3
bulges: 2

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pre-miRNA
ATTTTGAGTTAACGGAGAAGGTGGAAGTGAATGGCGCAAATGAACATCCACTCTACACTTTCCTTAAGGCCTAT

dot-bracket secondary structure
........((((.(((((..(((((.(((.(((.(......)..))).))))))))..))))))))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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