ABOUT THIS RECORDspecies: Meleagris gallopavo
miRNA family: miR-2260
source: miRNEST
Taxonomy by NCBI:
Meleagris gallopavo Meleagris Meleagridinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATGGTGGCTTTTTTGAAGAT miRNA* CTTTCAATGGCCAACCGAGGA mismatches: 4 bulges: 2 |
pre-miRNA
GAGAATCCATTTATGGTGGCTTTTTTGAAGATGAAAGCTTTGCTGTAAAGCACAACAAAGAATTTCTTCTTTCAATGGCCAACCGAGGAAAGGATAC
dot-bracket secondary structure
....((((.(((.((((((((..((.(((((.((((.(((((.(((.....))).)))))..)))).))))).)).)))).))))..))).))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAGAATCCATTTATGGTGGCTTTTTTGAAGATGAAAGCTTTGCTGTAAAGCACAACAAAGAATTTCTTCTTTCAATGGCCAACCGAGGAAAGGATAC
dot-bracket secondary structure
....((((.(((.((((((((..((.(((((.((((.(((((.(((.....))).)))))..)))).))))).)).)))).))))..))).))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|O55035|PPIG_RAT: 0.00000000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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