miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gallus gallus, Anolis carolinensis, Taeniopygia guttata, Meleagris gallopavo, Lonchura striata domestica



ABOUT THIS RECORD

ID: MNEST009665
species: Meleagris gallopavo
miRNA family: miR-2260
source: miRNEST

Taxonomy by NCBI:
Meleagris gallopavo Meleagris Meleagridinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATGGTGGCTTTTTTGAAGAT

miRNA*
CTTTCAATGGCCAACCGAGGA

mismatches: 4
bulges: 2

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pre-miRNA
GAGAATCCATTTATGGTGGCTTTTTTGAAGATGAAAGCTTTGCTGTAAAGCACAACAAAGAATTTCTTCTTTCAATGGCCAACCGAGGAAAGGATAC

dot-bracket secondary structure
....((((.(((.((((((((..((.(((((.((((.(((((.(((.....))).)))))..)))).))))).)).)))).))))..))).))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|O55035|PPIG_RAT: 0.00000000003

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





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