ABOUT THIS RECORDspecies: Trichinella pseudospiralis
miRNA family: mir-467
source: miRNEST
Taxonomy by NCBI:
Trichinella pseudospiralis Trichinella Trichinellidae Trichocephalida Enoplia Enoplea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATATGTGTGTGCATGTATTTA miRNA* AAAATTCATATATATATAT mismatches: 2 bulges: 2 |
pre-miRNA
GCTGAAAATTTTGAAAATTCATATATATATATATATATATATATATATGTGTGTGCATGTATTTAATAATTTGTA
dot-bracket secondary structure
.....((((((((((.((.((((((((((((((((....))))))))))))))))...)).))))).)))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCTGAAAATTTTGAAAATTCATATATATATATATATATATATATATATGTGTGTGCATGTATTTAATAATTTGTA
dot-bracket secondary structure
.....((((((((((.((.((((((((((((((((....))))))))))))))))...)).))))).)))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
