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Species belonging to selected taxon:
Caenorhabditis elegans
,
Ancylostoma caninum
,
Ascaris suum
,
Heterorhabditis bacteriophora
,
Brachionus plicatilis
,
Pristionchus pacificus
,
Caenorhabditis japonica
,
Caenorhabditis brenneri
,
Strongyloides ratti
,
Brugia malayi
,
Trichinella spiralis
,
Meloidogyne hapla
,
Heterodera glycines
,
Meloidogyne incognita
,
Caenorhabditis remanei
,
Trichinella pseudospiralis
,
Onchocerca volvulus
,
Nippostrongylus brasiliensis
,
Meloidogyne chitwoodi
,
Globodera rostochiensis
,
Strongyloides stercoralis
,
Ancylostoma ceylanicum
ABOUT THIS RECORD
ID:
MNEST009668
species:
Trichinella pseudospiralis
miRNA family:
mir-467
source:
miRNEST
Taxonomy by NCBI:
Trichinella pseudospiralis
Trichinella
Trichinellidae
Trichocephalida
Enoplia
Enoplea
Nematoda
Pseudocoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATATGTGTGTGCATGTATTTA
miRNA*
AAAATTCATATATATATAT
mismatches:
2
bulges:
2
View larger
pre-miRNA
GCTGAAAATTTTG
AAAATTCATATATATATAT
ATATATATATAT
ATATGTGTGTGCATGTATTTA
ATAATTTGTA
dot-bracket secondary structure
.....((((((((
((.((.(((((((((((((
(((....)))))
)))))))))))...)).))))
).)))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record