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Species belonging to selected taxon:

Glossina morsitans morsitans, Cochliomyia hominivorax, Haematobia irritans irritans



ABOUT THIS RECORD

ID: MNEST009685
species: Haematobia irritans irritans
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Haematobia irritans irritans Haematobia irritans Haematobia Stomoxyini Muscinae Muscidae Muscoidea Calyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GATGCTGCTGCTGTTGCTGTT

miRNA*
 CTTTACAGCAGCAGCATTTG

mismatches: 3
bulges: 1
View larger
pre-miRNA
 GTTAACGGAGCCTGTGAATGTTGTTGCGGATGATGCTGCTGCTGTTGCTGTTGTATGATATGGACATGCGGCTGAACGTAATTAACTTGGTTATAGCCTT
GGATCCCGGGCGCAATGTATAGACCGCCAACCGTAGCTGCTGTCCCAAGTCTTAACTTTACAGCAGCAGCATTTGCTGCAGCAGCAATTACAGCTGCATT
CTC

dot-bracket secondary structure
........(((.(((((.(((((((((((..((((((((((((((....((((...(((.((((((.(((((((............(((..(((.(((((
((...))))).)).)))..)))...........)))))))))).))).))).))))...))))))))))))))..))))))))))).)))))))).....
...


SIMILARITIES
miRBase no hits

PMRD ptc-miRf10957-akr: 0.0006

microPC no hits		UniProt no hits

RFAM mir-598: 0.0007		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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