ABOUT THIS RECORDspecies: Meloidogyne chitwoodi
miRNA family: mir-1305
source: miRNEST
Taxonomy by NCBI:
Meloidogyne chitwoodi Meloidogyne Meloidogyninae Meloidogynidae Tylenchoidea Tylenchina Tylenchida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTAAACTCTAATGGGCGTC miRNA* GACTCATTGGACCTTTAAAAAG mismatches: 5 bulges: 1 |
pre-miRNA
GACTCATTGGACCTTTAAAAAGGAAAATAAACCAATTCTTTTTTAAACTCTAATGGGCGTCCGCAACTTT
dot-bracket secondary structure
..(((((((((..((((((((((((..........)))))))))))).))))))))).............
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GACTCATTGGACCTTTAAAAAGGAAAATAAACCAATTCTTTTTTAAACTCTAATGGGCGTCCGCAACTTT
dot-bracket secondary structure
..(((((((((..((((((((((((..........)))))))))))).))))))))).............
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
