ABOUT THIS RECORDspecies: Thunnus thynnus
miRNA family: mir-202
source: miRNEST
Taxonomy by NCBI:
Thunnus thynnus Thunnus Thunnini Scombrinae Scombridae Scombroidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGAGGCATAGGGCATGGGAAN miRNA* TCCTATGCATATACCTCTTT mismatches: 3 bulges: 1 |
pre-miRNA
CTGTTCCTTTTTCCTATGCATATACCTCTTTGAGATGTAACTTTACACAGAGGCATAGGGCATGGGAANATGGGGCT
dot-bracket secondary structure
....((((..(((((((((.(((.(((((.(((((......))).)).))))).)))..)))))))))...))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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CTGTTCCTTTTTCCTATGCATATACCTCTTTGAGATGTAACTTTACACAGAGGCATAGGGCATGGGAANATGGGGCT
dot-bracket secondary structure
....((((..(((((((((.(((.(((((.(((((......))).)).))))).)))..)))))))))...))))..
SIMILARITIES| miRBase fru-mir-202: 3e-19 PMRD no hits microPC no hits | UniProt no hits RFAM mir-202: 3e-19 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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