ABOUT THIS RECORDspecies: Agrostis stolonifera
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Agrostis stolonifera Agrostis Agrostidinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCCCTCCGTTCCAAAATAT miRNA* ATTTTGAAACGGAGTGAGT mismatches: 2 bulges: 0 |
pre-miRNA
TACAATCTTACTACTCCCTCCGTTCCAAAATATAAGATGTTTTAGCTTTGTGAAAAGAATATCTTATATTTTGAAACGGAGTGAGT
dot-bracket secondary structure
)...........((((.(((((((.((((((((((((((((....((((....)))))))))))))))))))).))))))).))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TACAATCTTACTACTCCCTCCGTTCCAAAATATAAGATGTTTTAGCTTTGTGAAAAGAATATCTTATATTTTGAAACGGAGTGAGT
dot-bracket secondary structure
)...........((((.(((((((.((((((((((((((((....((((....)))))))))))))))))))).))))))).))))
SIMILARITIES| miRBase osa-MIR1439: 6.0E-5 PMRD osa-miRf11780-akr: 1.0E-6 microPC miR1439: 7.0E-11 | UniProt no hits RFAM 2MIR1122: 7.0E-8 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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