ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: MIR399
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGCCAAAAGAGAGTTGCCCTG miRNA* GGGCACCTCTTCACTGGCATG mismatches: 5 bulges: 0 |
pre-miRNA
CATATCAGCAATAGGGCACCTCTTCACTGGCATGTATAAGTATAATATACTAATTCTTCAAGTATTTCTACGAGTCACATACATAACACGCCAAAAGAGA
GTTGCCCTGTTGCTGCTTT
dot-bracket secondary structure
.....(((((((((((((.(((((...((((((((((..(((.((.(((((.........))))))).))).......)))))).....))))...))))
).)))))))))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CATATCAGCAATAGGGCACCTCTTCACTGGCATGTATAAGTATAATATACTAATTCTTCAAGTATTTCTACGAGTCACATACATAACACGCCAAAAGAGA
GTTGCCCTGTTGCTGCTTT
dot-bracket secondary structure
.....(((((((((((((.(((((...((((((((((..(((.((.(((((.........))))))).))).......)))))).....))))...))))
).)))))))))))))....
SIMILARITIES| miRBase pvu-MIR399a: 0.00000009 PMRD pvu-miR399a: 0.00000009 microPC no hits | UniProt no hits RFAM mir-399: 0.000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
