miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST000078
species: Arachis duranensis
miRNA family: MIRf331
source: miRNEST

Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATAGCTGAAGAAGGAGAGGCT

miRNA*
 TCTCTTCTCTTCTTCTGTCT

mismatches: 4
bulges: 1
View larger
pre-miRNA
 CCCAATATCTGCACCCTTATTTTCTCTTCTCTTCTTCTGTCTCTCTTAAACATATCACCTGTACACCATGAAGATCTTCAACCCTTTCTGAATCGTTTTT
CCAAAACGATGAGTGTCCCTCGGACACTATATTCCTCAAAGGAATGAACCTCTCCAATCTTCACCATTCCACATTCTCCCTCGTCTCTTGGCCATACAAT
TAGCCTTCACAACCAATAATCTTACTAGCTTTCTTTGTTTTCCTTTTCTTTCTCTGGAAACTTCATCCAATGGATCTGAAAAACGAGATGGAGACAAGTT
ATCGAACAGCGGTAGGATGGTGATCTTTGAAAAGTACGAGACGGGGCGCGTGTTAGGGTAGGGGAACTTTGCGAAGGTATACTACGGGAGGAACCTGGCG
ACGAGTGAAAGTGTGGCGATTAAGGTGATAAAGAAGGATAGCTGAAGAAGGAGAGGCTGATAGAGCAGATTAAGAGA

dot-bracket secondary structure
......((((((....(((((.((((((((((((..((((((.((((.....((((((((...((...))..((((.(((...(((((...((((((((.
..)))))))).(((((((...))))))).(((((((...))))))).((((.(((((..(((.((..(((((((....(((((((((..(((........
..))).((((........((((((((.((..((((((((((..(((((.(((..((((.......))))..)))...)))))..))))))))))...(((
....))).)))))))))).))))...((....))...)))))))))...))))..)))...)))))..))).))))))..(((.((((.....))))...
...))))))))..))).)))).)))))))))))).))))))..)))).))))))))..))))).)))))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q8W1D5|CIPKP_ARATH: 0.000000002

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;