ABOUT THIS RECORDspecies: Arachis hypogaea
miRNA family: MIR166
source: miRNEST
Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCCCC miRNA* GGAATGTTGTCTGGCTCGAGA mismatches: 5 bulges: 0 |
pre-miRNA
TTGGCTGCTTCTGCTGCAAAGGTTAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATGAATTGTTTGATTTGATGATGATTAGTCA
AAGTGTCTAATAATCTCGGACCAGGCTTCATTCCCCCCATCCAACCTTTGCTGTATGCTTCTGCTT
dot-bracket secondary structure
).(((.((...(((.(((((((((..((.((...((((((..((((((.((((((....(((((((...(((...(((.((((((.......)))))).))
).))).))))))))))))).))))))..))))))...)).))))))))))).))).))....))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGGCTGCTTCTGCTGCAAAGGTTAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATGAATTGTTTGATTTGATGATGATTAGTCA
AAGTGTCTAATAATCTCGGACCAGGCTTCATTCCCCCCATCCAACCTTTGCTGTATGCTTCTGCTT
dot-bracket secondary structure
).(((.((...(((.(((((((((..((.((...((((((..((((((.((((((....(((((((...(((...(((.((((((.......)))))).))
).))).))))))))))))).))))))..))))))...)).))))))))))).))).))....))).
SIMILARITIES| miRBase pvu-MIR166a: 1.0E-10 PMRD gma-miR166b: 1.0E-10 microPC miR166: 5.0E-7 | UniProt no hits RFAM 6mir-166: 2.0E-7 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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