miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000124
species: Arachis hypogaea
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCCC

miRNA*
 GGAATGTTGTCTGGCTCGAGA

mismatches: 5
bulges: 0
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pre-miRNA
 TGGCTGCTTCTGCTGCAAAGGTTAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATGAATTGTTTGATTTGATGATGATTAGTCA
AAGTGTCTAATAATCTCGGACCAGGCTTCATTCCCCCCATCCAACCTTTGCTGTATGCTTCTGCTT

dot-bracket secondary structure
.(((.((...(((.(((((((((..((.((...((((((..((((((.((((((....(((((((...(((...(((.((((((.......)))))).))
).))).))))))))))))).))))))..))))))...)).))))))))))).))).))....))).


SIMILARITIES
miRBase pvu-MIR166a: 0.0000000001

PMRD gma-miR166b: 0.0000000001

microPC miR166: 0.0000005		UniProt no hits

RFAM mir-166: 0.0000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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