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ABOUT THIS RECORD

ID: MNEST000154
species: Arachis ipaensis
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGCACTGCCTCTTCCCTGGT

miRNA*
 TGGGATCAGGCAGAGCATGA

mismatches: 3
bulges: 1
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pre-miRNA
 TGTATTGATACTGGGATCAGGCAGAGCATGACTGGAGCTACCTATATACACATTTGTTCATTGAGTCACAGAAGGAAACACACACATATACATACACACTT
AGATAAAGACATGATACATCATCTCATCTATTGTGTCTATTCTCATGCACTGCCTCTTCCCTGGTTCTCTCT

dot-bracket secondary structure
).....((.(((((((..((((((.(((((.(((..(((........(((....)))......)))..)))..((((...............((.((((.(
((((...((.((((....)))).)))))))..)))).))))))))))).))))))..)))).)))..))...


SIMILARITIES
miRBase ahy-MIR408: 4.0E-8

PMRD ppt-miR408b: 9.0E-6

microPC miR408: 9.0E-6		UniProt no hits

RFAM 8MIR408: 0.0002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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