ABOUT THIS RECORDspecies: Arachis ipaensis
miRNA family: miR3509-3p
source: miRNEST
Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATCTAACGACTCTCAGTTATC miRNA* TAGCTAAGAATCGTTAGATGA mismatches: 2 bulges: 0 |
pre-miRNA
ACGTGAAGTTGATAGCTAAGAATCGTTAGATGAAAATTTAGTCCAATCAATCAAATTATCTAACGACTCTCAGTTATCAATTTCACA
dot-bracket secondary structure
..(((((((((((((((.(((.(((((((((((......................))))))))))).))).))))))))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACGTGAAGTTGATAGCTAAGAATCGTTAGATGAAAATTTAGTCCAATCAATCAAATTATCTAACGACTCTCAGTTATCAATTTCACA
dot-bracket secondary structure
..(((((((((((((((.(((.(((((((((((......................))))))))))).))).))))))))))))))).
SIMILARITIES| miRBase ahy-MIR3509: 5e-21 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
