ABOUT THIS RECORDspecies: Citrus reticulata
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Citrus reticulata Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTCCCTACTCCACCCATGC miRNA* ATGGGTGAGTAGGGAAGATA mismatches: 0 bulges: 1 |
pre-miRNA
TAGGTTTTGGTATGGGTGAGTAGGGAAGATAATTTAACTAAGTAATAATAATATCACTTTTTTCATTATTACTATTTACTTAAGGAATTTGTATATCTTCC
CTACTCCACCCATGCCATAGGTTT
dot-bracket secondary structure
)......((((((((((((((((((((((((.(((((.((((((.(((((((............))))))).)))))).))))).........))))))))
))))).))))))))))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAGGTTTTGGTATGGGTGAGTAGGGAAGATAATTTAACTAAGTAATAATAATATCACTTTTTTCATTATTACTATTTACTTAAGGAATTTGTATATCTTCC
CTACTCCACCCATGCCATAGGTTT
dot-bracket secondary structure
)......((((((((((((((((((((((((.(((((.((((((.(((((((............))))))).)))))).))))).........))))))))
))))).))))))))))).......
SIMILARITIES| miRBase ptc-MIR472a: 0.0004 PMRD ptc-miR472a: 0.0004 microPC miR482: 1.0E-53 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR482 from microPC (MNEST046545) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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