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Species belonging to selected taxon:
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Citrus aurantium
,
Citrus reticulata
,
Citrus sinensis
,
Citrus unshiu
,
Eucalyptus globulus
,
Eucalyptus gunnii
,
Gossypium arboreum
,
Gossypium hirsutum
,
Gossypium raimondii
,
Limnanthes alba
,
Paullinia cupana var. sorbilis
,
Raphanus raphanistrum
,
Raphanus raphanistrum subsp. landra
,
Raphanus raphanistrum subsp. maritimus
,
Raphanus sativus
,
Raphanus sativus var. oleiformis
,
Thellungiella halophila
,
Theobroma cacao
,
Tropaeolum majus
,
Carica papaya
,
Citrus clementina
,
Arabidopsis thaliana
,
Brassica oleracea
ABOUT THIS RECORD
ID:
MNEST000383
species:
Citrus reticulata
miRNA family:
MIR482
source:
miRNEST
Taxonomy by NCBI:
Citrus reticulata
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTTCCCTACTCCACCCATGC
miRNA*
ATGGGTGAGTAGGGAAGATA
mismatches:
0
bulges:
1
View larger
pre-miRNA
AGGTTTTGGT
ATGGGTGAGTAGGGAAGATA
ATTTAACTAAGTAATAATAATATCACTTTTTTCATTATTACTATTTACTTAAGGAATTTGTATA
TCTTCC
CTACTCCACCCATGC
CATAGGTTT
dot-bracket secondary structure
......((((
((((((((((((((((((((
.(((((.((((((.(((((((............))))))).)))))).))))).........))
))))))
))))).)))))))))
)).......
SIMILARITIES
miRBase
ptc-MIR472a
:
0.0004
PMRD
ptc-miR472a
:
0.0004
microPC
miR482
:
1e-53
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record