miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST000505
species: Curcuma longa
miRNA family: MIRf1568
source: miRNEST

Taxonomy by NCBI:
Curcuma longa Curcuma Zingiberaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGGCGTCGTCTTCGCTCCCGA

miRNA*
 GGGACCGGAAGCCCCCGCCGCT

mismatches: 4
bulges: 1
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pre-miRNA
 GCTTCCTTACGGCCGTGGCGTTCCTAACGGTCGGCGTCGTCTTCGCTCCCGATGTCTTCGGCTCGGGACCGGAAGCCCCCGCCGCTGCCGTCACCGCGGC
CAAGCTCTGCCATC

dot-bracket secondary structure
..........((((((((........((((((((((..((.((((.((((((.(((...))))))))).)))).))...)))))..)))))..)))))))
)..((...))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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