miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST000647
species: Festuca arundinacea
miRNA family: MIRf171
source: miRNEST

Taxonomy by NCBI:
Festuca arundinacea Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACGATTTCTGCATCGGCGA

miRNA*
 GCTGGTGCTGATTCGACAGA

mismatches: 4
bulges: 1
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pre-miRNA
 ATTCTAAACAATGCTGGTGCTGATTCGACAGAGGGATTTTTCGGGCCGCAACATGGCACGAGAGTCTTCGATATCATTGACGATTTCTGCATCGGCGAAT
TGAAAGA

dot-bracket secondary structure
...........(((((((((.((.(((.(((.((((.((((((.((((.....)))).))))))...))....)).))).)))..)).)))))))))..(
(....))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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