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ABOUT THIS RECORD
ID:
MNEST000713
species:
Oryza sativa
miRNA family:
MIRf75
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCGAGACGAATCTTTTAAGT
miRNA*
TTAATAAATTCATCTCGCAGT
mismatches:
4
bulges:
0
View larger
pre-miRNA
TTACACAGTTCATAAGGAAAT
TGCGAGACGAATCTTTTAAGT
GTNATTGCGTCATGATTTGACAATGTGGTGTTACAGGTAAACATTTGCTAATGACAAA
TTAATTAGGC
TTAATAAATTCATCTCGCAGT
TTTCTGGCGGAG
dot-bracket secondary structure
.........((...(((((((
(((((((.((((...((((((
((.(((..(((((....(((((......)))))..(((((....))))).))))).))
)..))...))
))))...)))).)))))))))
)))))....)).
SIMILARITIES
miRBase
osa-MIR2124d
:
3e-36
PMRD
osa-miR442
:
2e-33
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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