ABOUT THIS RECORDspecies: Gnetum gnemon
miRNA family: MIR4208
source: miRNEST
Taxonomy by NCBI:
Gnetum gnemon Gnetum Gnetaceae Gnetales Gnetopsida Gnetophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGATTTTATTTTTGGCAATGC miRNA* ATTGTTTGAGCATTGTCACA mismatches: 5 bulges: 1 |
pre-miRNA
GAAGGCAGTGTTGATTTTATTTTTGGCAATGCTACAGCATTGTTTGAGCATTGTCACATTCACTGC
dot-bracket secondary structure
....((((((.((((.....(((.((((((((....)))))))).)))....))))....))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAAGGCAGTGTTGATTTTATTTTTGGCAATGCTACAGCATTGTTTGAGCATTGTCACATTCACTGC
dot-bracket secondary structure
....((((((.((((.....(((.((((((((....)))))))).)))....))))....))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9LVQ0|PME31_ARATH: 0.000004 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
