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ABOUT THIS RECORD

ID: MNEST000780
species: Gossypium hirsutum
miRNA family: miR172c
source: miRNEST

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAGCATCATCAAGATTCACA

miRNA*
 AGAATCCTGATGATGCTGCAG

mismatches: 3
bulges: 0
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pre-miRNA
 GATGATTGCACAACAGTCACTGTTTGCTGTTGGAGCATCATCAAGATTCACAATTTTAGGGTTCTTTTTTGATTGATTTGATCAATCAGCCTTTTTATGA
TTGAGAATCCTGATGATGCTGCAGTGGCAATAAGTGGCTAAATATTCCAATT

dot-bracket secondary structure
..............(((((((..(((((((((.((((((((((.(((((.(((((..(((((.......((((((((...))))))))))))).....))
))).))))).)))))))))).)))))))))..))))))).............


SIMILARITIES
miRBase ghr-MIR172: 1e-66

PMRD ath-miRf11051-akr: 0.0000000001

microPC miR172: 0.0001		UniProt no hits

RFAM mir-172: 0.000000009		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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