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ABOUT THIS RECORD

ID: MNEST000883
species: Helianthus petiolaris
miRNA family: MIR162
source: miRNEST

Taxonomy by NCBI:
Helianthus petiolaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGATAAACCTCTGCATCCA

miRNA*
 GATTCAGCGGTTCATCGATC

mismatches: 3
bulges: 0
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pre-miRNA
 TTTATTGTCATTTGTGTTCCGTAGAGGATCACTGGATTCAGCGGTTCATCGATCTGTTCCATAATCCTAATGATTAAATGTTCATACGACGATTGAGAGAG
GTGGGAAATGGAATCGATCGATAAACCTCTGCATCCAGTGTTCTTCCTGCTTAGCACGATCTTGTTT

dot-bracket secondary structure
).......((.(((((((..((((((((.((((((((.(((.((((.(((((((.(((((((..(((((....((((.((((.....)))).)))).....
.))))).))))))).))))))).)))).))).)))))))).)))).))))..)))))))...))...


SIMILARITIES
miRBase osa-MIR162a: 6.0E-10

PMRD osa-miR162a: 6.0E-10

microPC miR162: 2.0E-56		UniProt no hits

RFAM 2MIR162_2: 1.0E-8		most similar mature miRNAs

Identical with: miR162 from microPC (MNEST045991)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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