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ABOUT THIS RECORD

ID: MNEST000902
species: Helianthus tuberosus
miRNA family: MIR403
source: miRNEST

Taxonomy by NCBI:
Helianthus tuberosus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTAGATTCACGCACAAACTCG

miRNA*
 TGTTTGTGCGTGAATCTAACG

mismatches: 1
bulges: 0
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pre-miRNA
 GCCTTCCGAACAGCCATATTTCGTGTTTGTGCGTGAATCTAACGATCCTTAATCTTATCACATCACCAGTAATCATACTTTTTGTTTGTCTGTTTGTTGCC
AGACAGGATCTGTTGGTTCGTTAGATTCACGCACAAACTCGTAATATGTCTCTTCATTTG

dot-bracket secondary structure
)......(((.((.((((((.((.(((((((((((((((((((((.((.(((((((.((.((.((.(((....((.((.....)).)).)))..)).))..
.)).))))).))..)).))))))))))))))))))))).)).)))))).)).))).....


SIMILARITIES
miRBase tcc-MIR403a: 1.0E-10

PMRD stu-miR403: 8.0E-9

microPC miR403: 9.0E-52		UniProt no hits

RFAM 3MIR403: 6.0E-7		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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