miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST000953
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCCGTCTCAAAATAAGTGT

miRNA*
 ACATTTATTTTGAGGCGGAGCGA

mismatches: 1
bulges: 2
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pre-miRNA
 ACAGTNTGCTCCCTCCGTCTCAAAATAAGTGTCTNAGCTTTATACTAGNTTTAGTATAAAGNTATACTAAGCTTGAAACATTTATTTTGAGGCGGAGCGA
GTATTAAT

dot-bracket secondary structure
.......((((.(((((((((((((((((((((..((((((((((((....)))))))..........))))).))..))))))))))))))))))).))
))......


SIMILARITIES
miRBase osa-MIR812k: 0.0003

PMRD hpr-miR1120: 0.000001

microPC miR1439: 4e-16		UniProt no hits

RFAM MIR1122: 4e-16		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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