ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIR1436
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATTTTGGGACGGAGGGAGT miRNA* TCCCTCCGTCCCAAAATAAGT mismatches: 0 bulges: 0 |
pre-miRNA
GTACTCCCTCCGTCCCAAAATAAGTCTCTTAAGCTTAGTATAACTTTGTACTAGCTCTAGTACAAAGTTGATACAGTTATTTTGGGACGGAGGGAGTA
dot-bracket secondary structure
.((((((((((((((((((((((((.......))...((((((((((((((((....)))))))))))).))))..))))))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
GTACTCCCTCCGTCCCAAAATAAGTCTCTTAAGCTTAGTATAACTTTGTACTAGCTCTAGTACAAAGTTGATACAGTTATTTTGGGACGGAGGGAGTA
dot-bracket secondary structure
.((((((((((((((((((((((((.......))...((((((((((((((((....)))))))))))).))))..))))))))))))))))))))))
SIMILARITIES| miRBase osa-MIR1862c: 0.000001 PMRD osa-miRf11605-akr: 0.0000003 microPC miR1439: 8e-51 | UniProt no hits RFAM MIR1122: 3e-32 | most similar mature miRNAs |
Identical with: miR1439 from microPC (MNEST045970) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
