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ABOUT THIS RECORD

ID: MNEST001246
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCCGTCCCACAATAAGTAC

miRNA*
 ATTTATTTTGGGACGGATGGT

mismatches: 4
bulges: 0
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pre-miRNA
 TTTTGAAGTCAATGATTCCCTTTTGTATACTACCTCCGTCCCACAATAAGTACAATCATGAGTTTTCGCGCCCAACTTTAATCGCCCGTCTTATTTAAAAT
TTTTTATAATTAGCATTTTTGTTGTTATAAGATGATAAAACATGAATAGTACTTTACTCGTGACTTATATCTTTAGTTTTTTTAAAAAAAAATTTAAATA
AAACGAATGGTCAAAGTTGGGCGCGGAAAACCATGACTGCATTTATTTTGGGACGGATGGTGTAGGAAAGAGGATGCGAGAATATGGTT

dot-bracket secondary structure
)...........((..((((((((.(((((((..(((((((((.(((((((.((.(((((..(((((((((((((((((.((((..(((.(((((((((.(
(((((.(((..(((..((((((((((....))))))))))(((((.(((....))).)))))...((......)))))...))).)))))).))))))))
).)))..)))).)))))))))))))))))..))))).)).))))))).)))))))))))))))).))))).)))..))...........


SIMILARITIES
miRBase osa-MIR812k: 1.0E-39

PMRD osa-miR812g: 8.0E-26

microPC miR812: 3.0E-13		UniProt no hits

RFAM 2MIR812: 4.0E-74		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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