ABOUT THIS RECORDspecies: Lactuca serriola
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Lactuca serriola Lactuca Lactucinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCATGG miRNA* ATGGTGGTGGTGGTGGTGGAG mismatches: 2 bulges: 0 |
pre-miRNA
GCATGCTTTCACTGGTCCTCAGATGTATGGAAATGGTGGTGGTGGTGGTGGAGCTGTTCATGGTTTTAACTATGGCGGCNATCATCATCATCATCATCAT
GGACATGGAGGCCATCAGCAGAGAGGTCATC
dot-bracket secondary structure
.....(((((.(((((((((..((((......(((((((((((((((((((.(((((.((((((....)))))))))))..)))))))))))))))))))
..)))).))))..)))))..)))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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GCATGCTTTCACTGGTCCTCAGATGTATGGAAATGGTGGTGGTGGTGGTGGAGCTGTTCATGGTTTTAACTATGGCGGCNATCATCATCATCATCATCAT
GGACATGGAGGCCATCAGCAGAGAGGTCATC
dot-bracket secondary structure
.....(((((.(((((((((..((((......(((((((((((((((((((.(((((.((((((....)))))))))))..)))))))))))))))))))
..)))).))))..)))))..)))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
