miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa



ABOUT THIS RECORD

ID: MNEST001348
species: Lactuca serriola
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Lactuca serriola Lactuca Lactucinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATGG

miRNA*
ATGGTGGTGGTGGTGGTGGAG

mismatches: 2
bulges: 0

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pre-miRNA
GCATGCTTTCACTGGTCCTCAGATGTATGGAAATGGTGGTGGTGGTGGTGGAGCTGTTCATGGTTTTAACTATGGCGGCNATCATCATCATCATCATCAT
GG
ACATGGAGGCCATCAGCAGAGAGGTCATC


dot-bracket secondary structure
.....(((((.(((((((((..((((......(((((((((((((((((((.(((((.((((((....)))))))))))..)))))))))))))))))))
..
)))).))))..)))))..)))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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