ABOUT THIS RECORDspecies: Lolium perenne
miRNA family: MIRf1677
source: miRNEST
Taxonomy by NCBI:
Lolium perenne Lolium Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTACTGGTGGTGGTGGCGC miRNA* GCCGCCACCGCCGGCGAGCAA mismatches: 5 bulges: 0 |
pre-miRNA
ACAACAACAACTACTACTGGTGGTGGTGGCGCATCTCCTCAAGACTTTCGGCAAAGTATAGCAGCGCCGCCACCGCCGGCGAGCAAGACGGCGA
dot-bracket secondary structure
................((((((((((((((((..((.......(((((....)))))..))..))))))))))))))))...((......))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ACAACAACAACTACTACTGGTGGTGGTGGCGCATCTCCTCAAGACTTTCGGCAAAGTATAGCAGCGCCGCCACCGCCGGCGAGCAAGACGGCGA
dot-bracket secondary structure
................((((((((((((((((..((.......(((((....)))))..))..))))))))))))))))...((......))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
