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ABOUT THIS RECORD

ID: MNEST001440
species: Lotus japonicus
miRNA family: miR160c
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCGTACAAGGAGCCAAGCATG

miRNA*
 TGCCTGGCTCCCTGTATGCCA

mismatches: 2
bulges: 0
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pre-miRNA
 TTTTGGTATTTTGTTATTTGTTTATTAGCATACTTTGTGTGCCTGGCTCCCTGTATGCCATTTGTAGAGCACATCACCACGGTGATGGCCTAATGAATGG
CGTACAAGGAGCCAAGCATGCTGTGTGTTGCTATTTAGCTTCTACAAATTTCTTAT

dot-bracket secondary structure
....((...(((((...(((..((.((((((((...((((((.(((((((.((((((((((((((((.((.((((((....)))))))))).))))))))
)))))).))))))).)))))).)))))))).))..))).....)))))...))...


SIMILARITIES
miRBase mtr-MIR160d: 0.00000000000003

PMRD mtr-miR160d: 0.00000000000003

microPC miR160: 0.00000000003		UniProt no hits

RFAM mir-160: 0.00000000001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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