ABOUT THIS RECORDspecies: Musa ABB Group
miRNA family: MIR397
source: miRNEST
Taxonomy by NCBI:
Musa ABB Group Musa x paradisiaca Eumusa Musa Musaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTGAGTGCAGCGTTGATGA miRNA* ACCAACGCTGCACCCAATAA mismatches: 2 bulges: 0 |
pre-miRNA
AGAGGACCTGGATCGAAGGCATCATTGAGTGCAGCGTTGATGAGAATCCAGTTTCCCTGATGATTAGGAACATGGGGGGTTTCACCAACGCTGCACCCAAT
AATGCCTTCGACGTCTTGGAA
dot-bracket secondary structure
).....((.(((((((((((((.((((.(((((((((((.(((((.(((((((..(((((...)))))))).))))...))))).))))))))))).))))
.))))))))))..))).))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGAGGACCTGGATCGAAGGCATCATTGAGTGCAGCGTTGATGAGAATCCAGTTTCCCTGATGATTAGGAACATGGGGGGTTTCACCAACGCTGCACCCAAT
AATGCCTTCGACGTCTTGGAA
dot-bracket secondary structure
).....((.(((((((((((((.((((.(((((((((((.(((((.(((((((..(((((...)))))))).))))...))))).))))))))))).))))
.))))))))))..))).))..
SIMILARITIES| miRBase bdi-MIR397b: 6.0E-9 PMRD bdi-miR2508: 6.0E-9 microPC miR397: 2.0E-5 | UniProt no hits RFAM 7MIR397: 3.0E-8 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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