ABOUT THIS RECORDspecies: Musa ABB Group
miRNA family: MIR160
source: miRNEST
Taxonomy by NCBI:
Musa ABB Group Musa x paradisiaca Eumusa Musa Musaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCCTGGCTCCCTGCATGCCA miRNA* GCGTGTGAGGAGCCAAGCATA mismatches: 2 bulges: 0 |
pre-miRNA
AAGAAGAGGTGAAATGGACTGTGCCTGGCTCCCTGCATGCCACTCGTATCGACGCCAATCATACCCATGGATTGGCAACTGCGGCTGGCGTGTGAGGAGC
CAAGCATACCTCTCACTCTCTCTCTC
dot-bracket secondary structure
.(((((((((((...((..(((((.(((((((.(((((((((.(((((.....(((((((.........)))))))...))))).))))))))).)))))
)).)))))))..)))).)))).))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAGAAGAGGTGAAATGGACTGTGCCTGGCTCCCTGCATGCCACTCGTATCGACGCCAATCATACCCATGGATTGGCAACTGCGGCTGGCGTGTGAGGAGC
CAAGCATACCTCTCACTCTCTCTCTC
dot-bracket secondary structure
.(((((((((((...((..(((((.(((((((.(((((((((.(((((.....(((((((.........)))))))...))))).))))))))).)))))
)).)))))))..)))).)))).))).
SIMILARITIES| miRBase rco-MIR160b: 0.0000004 PMRD ptc-miR160h: 0.000006 microPC miR160: 0.000002 | UniProt no hits RFAM mir-160: 0.000007 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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