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ABOUT THIS RECORD

ID: MNEST001611
species: Nicotiana langsdorffii x Nicotiana sanderae
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Nicotiana langsdorffii x Nicotiana sanderae Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCACA

miRNA*
 TGCTCACTTCTCTTTCTGTCACC

mismatches: 0
bulges: 2
View larger
pre-miRNA
 TTTTTATGGTGGAGAGCAATAGGAGGGGGAGGAACCAGAGAGAGGACAGACTGACAGAAGAGAGTGAGCACACGCACACAATTGTATACAGTGTATACTT
TTGTGTTTATATTATTTGCGTGTGCTCACTTCTCTTTCTGTCACCTATTTGTTTTCTTCCCTCTCTTGCCTTCCCCTTTTTTGCTTCCAATAC

dot-bracket secondary structure
.........((((.(((((.((((((((((((.....(((((((((((((.((((((((((((((((((((((((((((((..((((((...))))))..
))))))...........)))))))))))).)))).))))))))....))))).......)))))))).)))))))))))))))))))))....


SIMILARITIES
miRBase tcc-MIR156c: 0.00000000004

PMRD cpt-miR156a: 0.00000004

microPC miR156: 7e-47		UniProt no hits

RFAM mir-156: 0.00000005		most similar mature miRNAs

Identical with: miR156 from microPC (MNEST046707)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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