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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST001611
species: Nicotiana langsdorffii x Nicotiana sanderae
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Nicotiana langsdorffii x Nicotiana sanderae Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCACA

miRNA*
 TGCTCACTTCTCTTTCTGTCACC

mismatches: 0
bulges: 2
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pre-miRNA
 TTTTTATGGTGGAGAGCAATAGGAGGGGGAGGAACCAGAGAGAGGACAGACTGACAGAAGAGAGTGAGCACACGCACACAATTGTATACAGTGTATACTT
TTGTGTTTATATTATTTGCGTGTGCTCACTTCTCTTTCTGTCACCTATTTGTTTTCTTCCCTCTCTTGCCTTCCCCTTTTTTGCTTCCAATAC

dot-bracket secondary structure
.........((((.(((((.((((((((((((.....(((((((((((((.((((((((((((((((((((((((((((((..((((((...))))))..
))))))...........)))))))))))).)))).))))))))....))))).......)))))))).)))))))))))))))))))))....


SIMILARITIES
miRBase tcc-MIR156c: 0.00000000004

PMRD cpt-miR156a: 0.00000004

microPC miR156: 7e-47		UniProt no hits

RFAM mir-156: 0.00000005		most similar mature miRNAs

Identical with: miR156 from microPC (MNEST046707)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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