ABOUT THIS RECORDspecies: Panax ginseng
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Panax ginseng Panax Araliaceae Apiineae Apiales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTGCCAATTCCTCCCATTC miRNA* AGTGGGGGGCTTAGCAAGAAA mismatches: 2 bulges: 2 |
pre-miRNA
GGAGGCAGAGGTAGTGGGGGGCTTAGCAAGAAAAATAAACAACTTCAATTCGCTATTTTTCTTGCCAATTCCTCCCATTCCAATGGTTT
dot-bracket secondary structure
.....((..((.(((((((((.((.((((((((((((................)))))))))))).))..)))))))))))..))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGAGGCAGAGGTAGTGGGGGGCTTAGCAAGAAAAATAAACAACTTCAATTCGCTATTTTTCTTGCCAATTCCTCCCATTCCAATGGTTT
dot-bracket secondary structure
.....((..((.(((((((((.((.((((((((((((................)))))))))))).))..)))))))))))..))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
