miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Panax ginseng, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST001685
species: Panax ginseng
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Panax ginseng Panax Araliaceae Apiineae Apiales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTTGCCAATTCCTCCCATTC

miRNA*
AGTGGGGGGCTTAGCAAGAAA

mismatches: 2
bulges: 2

View larger
pre-miRNA
GGAGGCAGAGGTAGTGGGGGGCTTAGCAAGAAAAATAAACAACTTCAATTCGCTATTTTTCTTGCCAATTCCTCCCATTCCAATGGTTT

dot-bracket secondary structure
.....((..((.(((((((((.((.((((((((((((................)))))))))))).))..)))))))))))..))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;