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ABOUT THIS RECORD

ID: MNEST001705
species: Panicum virgatum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATACTCCCTTCGTTCCAAATT

miRNA*
 TTTGGAACGGAGGAAGTAGCT

mismatches: 2
bulges: 0
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pre-miRNA
 AAACCACGCCAATACTCCCTTCGTTCCAAATTATAAGTCACAAAGAGTCTTGGAGAGTCAGTTTTTTTAATTTGACTAAATTTATATAACAAAATAATAA
CATTTATGATACCAATTAAGTATTATTAGATTCTTTGTTAGCTATATTTTCATAGTATACCTATTTGATGTCATAAATTTTTGCGTTTCTATTTATAATT
TTAGTCAAACTTTGAGATGGTTTGACTCTCCAAAATTCTTGGAATTACTTATAATTTGGAACGGAGGAAGTAGCTCCTTGCGC

dot-bracket secondary structure
......(((...((((.(((((((((((((((((((((....((((((.((((((((((((...((((((((((((((((.(((((.....((((...((
.((((((((((.(((.((.((((.................(((((......))))))))).)).))).)))))))))).))...)))).....))))).)
)))))))))..))))))....)))))))))))).))))))......))))))))))))))))))))).)))).......))).


SIMILARITIES
miRBase osa-MIR819b: 0.001

PMRD osa-miR819b: 0.001

microPC no hits		UniProt no hits

RFAM MIR1122: 0.00000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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