ABOUT THIS RECORDspecies: Petunia axillaris subsp. axillaris
miRNA family: MIR319
source: miRNEST
Taxonomy by NCBI:
Petunia axillaris subsp. axillaris Petunia axillaris Petunia Petunioideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTGGACTGAAGGGAGCTCC miRNA* AGCTCTCTCCAGTCCAGTCC mismatches: 2 bulges: 0 |
pre-miRNA
GAGAAATTAAGGAGCTCTCTCCAGTCCAGTCCGAGGCAGATCGAAGGCTATAAAAACAGCTGCTGACTCGTTGATTCTTAAGCACATCAATAAGTGTAAA
GAAATTGAGGTGTTTGGGATTCAACGATGCATGAGCTGTATTTAGCTATCGCTGTCGCGTCTTGGACTGAAGGGAGCTCCCTGCTATGC
dot-bracket secondary structure
((....))..((((((((((.((((((((..((.(((((...((.(((((..((.((((((..((..(((((((.((((((((((.(((((.........
...))))).)))))))))).)))))))..))..)))))).))))))).)).))))).))..)))))))).)))))))))).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GAGAAATTAAGGAGCTCTCTCCAGTCCAGTCCGAGGCAGATCGAAGGCTATAAAAACAGCTGCTGACTCGTTGATTCTTAAGCACATCAATAAGTGTAAA
GAAATTGAGGTGTTTGGGATTCAACGATGCATGAGCTGTATTTAGCTATCGCTGTCGCGTCTTGGACTGAAGGGAGCTCCCTGCTATGC
dot-bracket secondary structure
((....))..((((((((((.((((((((..((.(((((...((.(((((..((.((((((..((..(((((((.((((((((((.(((((.........
...))))).)))))))))).)))))))..))..)))))).))))))).)).))))).))..)))))))).)))))))))).........
SIMILARITIES| miRBase vvi-MIR319b: 0.00000000001 PMRD vvi-miR319b: 0.00000000001 microPC miR319: 0.0000002 | UniProt no hits RFAM MIR159: 0.0000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
