ABOUT THIS RECORDspecies: Phaseolus acutifolius
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCGTCATCATCATCACCT miRNA* GTGGATGTGATGACATAATGGGG mismatches: 3 bulges: 2 |
pre-miRNA
AAACGAGCATCATCATCATCTTCATCGTCATCATCATCACCTGTGTCTTCTAGTTCTCTATCTTCACTGTCCTCCAGCAATCATGCTGCGGATTCACATG
GTTCCAAAGAGGTTGGAGAGGAGAGCTTTTACGACACAGGTGGATGTGATGACATAATGGGGTTGATCGGTGCTGGAGAT
dot-bracket secondary structure
.....((((((((((....((((((.((((((((..(((((((((((....((((((((.((((((....(((((((((....))))).(((.((....)
).)))...)))).)))))))))))))).....)))))))))))..))))))))...)))))).)))).))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAACGAGCATCATCATCATCTTCATCGTCATCATCATCACCTGTGTCTTCTAGTTCTCTATCTTCACTGTCCTCCAGCAATCATGCTGCGGATTCACATG
GTTCCAAAGAGGTTGGAGAGGAGAGCTTTTACGACACAGGTGGATGTGATGACATAATGGGGTTGATCGGTGCTGGAGAT
dot-bracket secondary structure
.....((((((((((....((((((.((((((((..(((((((((((....((((((((.((((((....(((((((((....))))).(((.((....)
).)))...)))).)))))))))))))).....)))))))))))..))))))))...)))))).)))).))))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
